BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB035F11SP1|AL430097
(875 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1388 1719 0.0
>3x_Contig1388
Length = 8256
Score = 1719 bits (867), Expect = 0.0
Identities = 873/875 (99%)
Strand = Plus / Plus
Query: 1 atccgttcttcagacagttaactgggatcaccttcaaaccacacatagcagcagaggcgg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1779 atccgttcttcagacagttaactgggatcaccttcaaaccacacatagcagcagaggcgg 1838
Query: 61 ggtttgtaccatgtgcagagacagggatcaaacatatgtaacggtgggtttctccgcggt 120
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 1839 ggtttgtaccatgtgcagagacagggatcaaacatatgttacggtgggtttctccgcggt 1898
Query: 121 cttcgaagtatcttctgatgactctaagaccagcgtattcaccttgagctccagagtttg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1899 cttcgaagtatcttctgatgactctaagaccagcgtattcaccttgagctccagagtttg 1958
Query: 181 gttgtaatgaaacttcatcgaatccggtaatagatgcaagatctttttccaagtttttga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1959 gttgtaatgaaacttcatcgaatccggtaatagatgcaagatctttttccaagtttttga 2018
Query: 241 tcaaaacctcgtatccttccacttgatcccttggttggaatggatggatattggcaaact 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2019 tcaaaacctcgtatccttccacttgatcccttggttggaatggatggatattggcaaact 2078
Query: 301 gtggccaggtgattggaatcatctcgacagtggcattcaacttcatggtacatgatccaa 360
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 2079 gtggccaggtgattggaatcatctcgacagttgcattcaacttcatggtacatgatccaa 2138
Query: 361 gtgggatcattgagtttgccaaagataaatcacgggattgtagacggtgtaagtatctta 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2139 gtgggatcattgagtttgccaaagataaatcacgggattgtagacggtgtaagtatctta 2198
Query: 421 gcattgctgtctcagaatgatgagtgttgaacacctcattggacaagatttcatcttgac 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2199 gcattgctgtctcagaatgatgagtgttgaacacctcattggacaagatttcatcttgac 2258
Query: 481 gggtcaattcttgcgggaactctggaagtgctactggcaattcattggcgttgcatccga 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2259 gggtcaattcttgcgggaactctggaagtgctactggcaattcattggcgttgcatccga 2318
Query: 541 ataattcgagtagggcgatcaaatcatctttggtgacagtttcgtcaagagataatgaaa 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2319 ataattcgagtagggcgatcaaatcatctttggtgacagtttcgtcaagagataatgaaa 2378
Query: 601 cggtttcattattgacttggtataaattgatttgatatttgtcgaccgcagtctttatga 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2379 cggtttcattattgacttggtataaattgatttgatatttgtcgaccgcagtctttatga 2438
Query: 661 aatcttgtgcggagattccgtttaactcaacagtcaaagtatcaaaccacgatttgttca 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2439 aatcttgtgcggagattccgtttaactcaacagtcaaagtatcaaaccacgatttgttca 2498
Query: 721 acaaagtatggtttgaagatgataacccattggccaatacggttgtgaatccgtaaactc 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2499 acaaagtatggtttgaagatgataacccattggccaatacggttgtgaatccgtaaactc 2558
Query: 781 tgccagcaatttcttttagaccttgtgggccatggtaaacacagtagtttgcagcaatat 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2559 tgccagcaatttcttttagaccttgtgggccatggtaaacacagtagtttgcagcaatat 2618
Query: 841 tagccaagagcgcttgtgcagtacaaatatttgaa 875
|||||||||||||||||||||||||||||||||||
Sbjct: 2619 tagccaagagcgcttgtgcagtacaaatatttgaa 2653
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6348
Number of Sequences: 1807
Number of extensions: 6348
Number of successful extensions: 29
Number of sequences better than 1.0e-20: 1
length of query: 875
length of database: 10,358,551
effective HSP length: 16
effective length of query: 859
effective length of database: 10,329,639
effective search space: 8873159901
effective search space used: 8873159901
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)